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Compiling pymol from subversion for 64bit ubuntuFrom $1Table of contentsA step by step guide follows 1) Install subversion to get the subversion repository for pymol sudo apt-get install subversion 2) Get the pymol source from subversion svn co https://pymol.svn.sourceforge.net/svnroot/pymol pymol 3) Change into the main pymol directory ( inside the trunk directory) where the configure script is present. And run configure ./configure Based on the errors install the dependencies below and then re-run configure 4) The following libraries were installed to satistdy the dependencies on pymol sudo apt-get install python2.5-dev sudo apt-get install libpng12 sudo apt-get install libpng3 sudo apt-get install freeglut3-dev sudo apt-get install libttf2 sudo apt-get install libfreetype6-dev ( may not be needed) sudo apt-get install ftgl-dev sudo apt-get install libfreetype6 sudo apt-get install libfreetype6-dev sudo apt-get install libxft2 sudo apt-get 5) Run ./config.status to create the Makefile 6) Run make
To update the software at any point : Go into the directory where you issued the svn command and say "svn update" svn update for eg $HOME/pymol I ran svn update After which all the files in the directories branches tags and trunk get updated hari@crystalmachine:~/pymol$ ls branches tags trunk Updating pymol to latest version after initial subversion build:Tp re-update ( allright its just update): 1) svn update. this will pull all the source thats changed on the repository after your last update and inform you ..... U trunk/pymol/layer5/main.c Updated to revision 3616. 2) run configure again as above : ./configure in the trunk/pymol directory . If at this point it complains about some missing libraries , find them by using the sudo apt-file search command for eg ./configure complained checking for main in -lglut... no Missing libglut. I run a sudo apt-file search libglut : harijay@me.com:~/pymol/trunk/pymol$ sudo apt-file search libglut. [sudo] password for harijay: freeglut3: /usr/lib/libglut.so.3 freeglut3: /usr/lib/libglut.so.3.8.0 freeglut3-dbg: /usr/lib/debug/usr/lib/libglut.so.3.8.0 freeglut3-dev: /usr/lib/libglut.a freeglut3-dev: /usr/lib/libglut.so ia32-libs: /usr/lib32/libglut.so.3 ia32-libs: /usr/lib32/libglut.so.3.8.0 mingw32-runtime: /usr/i586-mingw32msvc/lib/libglut.a I can see that libglut is present in the freeglut3-dev package so i install it harijay@me.com:~/pymol/trunk/pymol$ sudo apt-get install freeglut3-dev Then i can run configure again and make as i did above once all the dependencies in thew new code are satisfied
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